{
  "_id": "6a1f372bb401979e73428b04",
  "Package": "LPmerge",
  "Title": "Merging Linkage Maps by Linear Programming",
  "Version": "1.7",
  "Author": "Jeffrey Endelman",
  "Maintainer": "Jeffrey Endelman <endelman@wisc.edu>",
  "Description": "Creates a consensus genetic map by merging linkage maps\nfrom different populations.  The software uses linear\nprogramming (LP) to efficiently minimize the mean absolute\nerror between the consensus map and the linkage maps.  This\nminimization is performed subject to linear inequality\nconstraints that ensure the ordering of the markers in the\nlinkage maps is preserved.  When marker order is inconsistent\nbetween linkage maps, a minimum set of ordinal constraints is\ndeleted to resolve the conflicts.",
  "License": "GPL-3",
  "URL": "http://potatobreeding.cals.wisc.edu/software",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-15 05:49:57 UTC",
    "User": "root"
  },
  "Config/pak/sysreqs": "libglpk-dev",
  "Repository": "https://jendelman.r-universe.dev",
  "Date/Publication": "2018-06-07 16:43:50 UTC",
  "RemoteUrl": "https://github.com/cran/LPmerge",
  "RemoteRef": "HEAD",
  "RemoteSha": "038b338586cc74061a2c3ba0a4c8ce8401a5ccf1",
  "MD5sum": "1d71141e1c4850ceea93356041d500f9",
  "_user": "jendelman",
  "_type": "src",
  "_file": "LPmerge_1.7.tar.gz",
  "_fileid": "302d33d035eb650b07866951579d674e319327fb49754eb52f1b9e30a9716af1",
  "_filesize": 153176,
  "_sha256": "302d33d035eb650b07866951579d674e319327fb49754eb52f1b9e30a9716af1",
  "_created": "2026-05-15T05:49:57.000Z",
  "_published": "2026-06-02T20:03:55.249Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79161125091,
      "time": 126,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7010960110"
    },
    {
      "job": 79161124756,
      "time": 124,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7010959530"
    },
    {
      "job": 79161124948,
      "time": 141,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7011183112"
    },
    {
      "job": 79161124959,
      "time": 214,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7011149847"
    },
    {
      "job": 79161124568,
      "time": 136,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7010934455"
    },
    {
      "job": 79161124221,
      "time": 99,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7368502665"
    },
    {
      "job": 79161125054,
      "time": 81,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7010950804"
    },
    {
      "job": 79161124847,
      "time": 118,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7010958447"
    },
    {
      "job": 79161124969,
      "time": 115,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7010959828"
    }
  ],
  "_buildurl": "https://github.com/r-universe/jendelman/actions/runs/25902600594",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/LPmerge",
  "_commit": {
    "id": "038b338586cc74061a2c3ba0a4c8ce8401a5ccf1",
    "author": "Jeffrey Endelman <endelman@wisc.edu>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 1.7\n",
    "time": 1528389830
  },
  "_maintainer": {
    "name": "Jeffrey Endelman",
    "email": "endelman@wisc.edu",
    "login": "jendelman",
    "uuid": 51009800
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "Rglpk",
      "role": "Depends"
    },
    {
      "package": "Matrix",
      "role": "Depends"
    }
  ],
  "_owner": "cran",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "jendelman",
      "count": 4,
      "uuid": 51009800
    }
  ],
  "_userbio": {
    "uuid": 51009800,
    "type": "user",
    "name": "Jeffrey Endelman"
  },
  "_downloads": {
    "count": 192,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/LPmerge"
  },
  "_mentions": 24,
  "_searchresults": 4,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/LPmerge.html",
    "manual.pdf"
  ],
  "_realowner": "jendelman",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.4",
      "date": "2013-08-04"
    },
    {
      "version": "1.5",
      "date": "2014-01-06"
    },
    {
      "version": "1.6",
      "date": "2014-08-16"
    },
    {
      "version": "1.7",
      "date": "2018-06-07"
    }
  ],
  "_exports": [
    "LPmerge"
  ],
  "_help": [
    {
      "page": "LPmerge",
      "title": "Merging linkage maps by linear programming.",
      "topics": [
        "LPmerge"
      ]
    }
  ],
  "_rundeps": [
    "lattice",
    "Matrix",
    "Rglpk",
    "slam"
  ],
  "_score": 2,
  "_indexed": true,
  "_nocasepkg": "lpmerge",
  "_universes": [
    "jendelman"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.7",
      "date": "2026-05-15T05:51:55.000Z",
      "distro": "noble",
      "commit": "038b338586cc74061a2c3ba0a4c8ce8401a5ccf1",
      "fileid": "9544eed8092208c77f7380765093db4640db476f892e77e5d1b301e3f830ac6e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jendelman/actions/runs/25902600594"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.7",
      "date": "2026-05-15T05:51:53.000Z",
      "distro": "noble",
      "commit": "038b338586cc74061a2c3ba0a4c8ce8401a5ccf1",
      "fileid": "b3f843fa94e8e702a8e95d218b586f75fe9e87fc4e875a64f40fd931af228bf9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jendelman/actions/runs/25902600594"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.7",
      "date": "2026-05-15T06:10:35.000Z",
      "commit": "038b338586cc74061a2c3ba0a4c8ce8401a5ccf1",
      "fileid": "ad600fc61872a162089fb39a87ce30de265077b59d266d40decc08d319e53eb2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jendelman/actions/runs/25902600594"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.7",
      "date": "2026-05-15T06:07:37.000Z",
      "commit": "038b338586cc74061a2c3ba0a4c8ce8401a5ccf1",
      "fileid": "127e34c2c281a3134037901e5a8a21d1473618bf47dc36095d33115fbbdfb188",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jendelman/actions/runs/25902600594"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.7",
      "date": "2026-05-15T05:51:05.000Z",
      "commit": "038b338586cc74061a2c3ba0a4c8ce8401a5ccf1",
      "fileid": "d9ce17bdd2e5d2cce38df46209c5d73053e412d7df07ae20c55692a2425de930",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jendelman/actions/runs/25902600594"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.7",
      "date": "2026-05-15T05:51:44.000Z",
      "commit": "038b338586cc74061a2c3ba0a4c8ce8401a5ccf1",
      "fileid": "516160d340aa8cd2011ed387ce7b40094420d3d29e2fa380e78f09bed24b3676",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jendelman/actions/runs/25902600594"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.7",
      "date": "2026-05-15T05:51:54.000Z",
      "commit": "038b338586cc74061a2c3ba0a4c8ce8401a5ccf1",
      "fileid": "a9dd607f72400426349961b8ba8032f24788ede9ef52d22192bf7a48d7310e0d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/jendelman/actions/runs/25902600594"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.7",
      "date": "2026-06-02T20:03:38.000Z",
      "commit": "038b338586cc74061a2c3ba0a4c8ce8401a5ccf1",
      "fileid": "45f96a652caa63aeae12a9f1f2f3c29ab1eafbd3f1f426f4ea2279b4a1dabe0b",
      "status": "success",
      "buildurl": "https://github.com/r-universe/jendelman/actions/runs/25902600594"
    }
  ]
}