Package: LPmerge 1.7
LPmerge: Merging Linkage Maps by Linear Programming
Creates a consensus genetic map by merging linkage maps from different populations. The software uses linear programming (LP) to efficiently minimize the mean absolute error between the consensus map and the linkage maps. This minimization is performed subject to linear inequality constraints that ensure the ordering of the markers in the linkage maps is preserved. When marker order is inconsistent between linkage maps, a minimum set of ordinal constraints is deleted to resolve the conflicts.
Authors:
LPmerge_1.7.tar.gz
LPmerge_1.7.zip(r-4.5)LPmerge_1.7.zip(r-4.4)LPmerge_1.7.zip(r-4.3)
LPmerge_1.7.tgz(r-4.4-any)LPmerge_1.7.tgz(r-4.3-any)
LPmerge_1.7.tar.gz(r-4.5-noble)LPmerge_1.7.tar.gz(r-4.4-noble)
LPmerge_1.7.tgz(r-4.4-emscripten)LPmerge_1.7.tgz(r-4.3-emscripten)
LPmerge.pdf |LPmerge.html✨
LPmerge/json (API)
| # Install 'LPmerge' in R: |
| install.packages('LPmerge', repos = c('https://jendelman.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 6 years agofrom:038b338586. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Sep 24 2024 |
| R-4.5-win | OK | Sep 24 2024 |
| R-4.5-linux | OK | Sep 24 2024 |
| R-4.4-win | OK | Sep 24 2024 |
| R-4.4-mac | OK | Sep 24 2024 |
| R-4.3-win | OK | Sep 24 2024 |
| R-4.3-mac | OK | Sep 24 2024 |
Exports:LPmerge
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Merging linkage maps by linear programming. | LPmerge |
